Description

Solanum chilense is a robust, perennial, herbaceous plant that at first grows erect, later lying. It reaches up to 1 metre (3 ft 3 in) high; its foliage reaches a similar diameter. It is found on rocky sites. The grayish stems become woody at the base and reach a diameter of 8 to 12 millimetres (0.31 to 0.47 in). The dense, velvety coat consists of white, single row, non-glandular trichomes up to 0.5 mm in length and occasional short-row, glandular trichomes with four or achtzelligen heads.

The sympodial units have two (rarely three) leaves. The internodes are 1–2 (rarely 5) cm long. The leaves are broken imparipinnate, (often only 5 to) 7 to 13 (rarely to 20) cm long and (rarely 2) 2.5 to 6.5 (rarely to 10) cm wide. They are greyish green. The coat is similar to the stem, but with less glandular trichomes.

The sheath consists of five to seven pairs of bulk leaves which are narrowly elliptical in shape, a broad-pointed to pointed tip, and inclined to appear sessile.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum chilense

• Solanum chilense 'LA1972 (cultivar)' ASM3284766v1

S genes

Solanum chilense 'LA1972 (cultivar)' ASM3284766v1 S genes

Query	Chr	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF15	Chr1	112267598	429411-430670	Solanum lycopersicum SL2.31, SLF15	96	F-box domain
SLF16	Chr1	112267598	3197375-3196194	Solanum lycopersicum SL2.31, SLF16	98.6	F-box domain
SLF22	Chr1	112267598	52197628-52196495	Solanum pennellii BK009218.1, SLF22	98.9	F-box domain
S-RNase	Chr1	112267598	53254187-53253954, 53253872-53253462	Solanum tuberosum MZ561405.1, SRNase-S2	93.2	Ribonuclease T2 family
SLF1	Chr1	112267598	53973803-53974972	Solanum pennellii KJ814858.1, SLF1	95.6	F-box domain
SLF17	Chr1	112267598	57585624-57586805	Solanum pimpinellifolium KU987617.1, SLF17	97.7	F-box domain
SLF22-2Ψ	Chr1	112267598	58167250-58168401	Solanum tuberosum DM8.1, SLF22-2	93.6	-
SLF6	Chr1	112267598	58298435-58299580	Solanum peruvianum KJ814850.1, SLF6	98.6	F-box domain
SLF5	Chr1	112267598	58329322-58330491	Solanum habrochaites KJ814915.1, SLF5-S1	96.2	F-box domain
SLF4	Chr1	112267598	58377381-58378547	Solanum pimpinellifolium KJ814871.1, SLF4	96.8	F-box domain
SLF2	Chr1	112267598	58497540-58498727	Solanum chilense KJ814882.1, SLF2	97.5	F-box domain
SLF7	Chr1	112267598	60463331-60462162	Solanum habrochaites KJ814923.1, SLF7-S1	99	F-box domain
SLF20	Chr1	112267598	60537341-60536175	Solanum peruvianum KU960913.1, SLF20	98.4	F-box domain
SLF21	Chr1	112267598	61050069-61048768	Solanum peruvianum KU960914.1, SLF21	99	F-box domain
SLF9	Chr1	112267598	62050478-62049339	Solanum pimpinellifolium KJ814875.1, SLF9	98.7	F-box domain
SLF10Ψ	Chr1	112267598	62539617-62540846	Solanum chilense KJ814888.1, SLF10	98.2	-
SLF11	Chr1	112267598	64562310-64563482	Solanum pennellii NM_001323461.1, SLF11	99.5	F-box domain
SLF12	Chr1	112267598	66102357-66101194	Solanum pennellii NM_001323464.1, SLF12	99.3	F-box domain
SLF13	Chr1	112267598	66796428-66795226	Solanum chilense KJ814891.1, SLF13	99.7	F-box domain
SLF14Ψ	Chr1	112267598	71191821-71190669	Solanum pimpinellifolium KJ814880.1, SLF14	97.3	-
SLF18	Chr1	112267598	84980313-84981428	Solanum lycopersicum SL2.31, SLF18	98.5	F-box domain
SLF19	Chr1	112267598	84998518-84997409	Solanum lycopersicum SL2.31, SLF19	97.7	F-box domain

Downloads

The Solanum chilense S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_chilense

Publications

NCBI BioProject PRJNA880259. Solanum chilense (LA1972) genome sequencing and assembly.

Stam R, Nosenko T, Hörger AC, Stephan W, Seidel M, Kuhn JMM, Haberer G, Tellier A. The de Novo Reference Genome and Transcriptome Assemblies of the Wild Tomato Species Solanum chilense Highlights Birth and Death of NLR Genes Between Tomato Species. G3 (Bethesda). 2019 Dec 3;9(12):3933-3941. doi: 10.1534/g3.119.400529.