Description

Solanum wrightii is a tree, sometimes armed with straight prickles; it can grow up to 12 metres tall. The tree is widely cultivated to provide shade in coffee plantations and as an ornamental.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum wrightii

• Solanum wrightii gwh_assembly A392

S genes

Solanum wrightii gwh_assembly A392 S genes

Query	Chr	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF18	Chr_4	223591992	77780668-77779556	Solanum tuberosum DM8.1, SLF18-2	87.6	F-box domain
SLF13	Chr_4	223591992	100714043-100712880	Solanum tuberosum DM8.1, SLF13	85.6	F-box domain
SLF11	Chr_4	223591992	129026037-129027206	Solanum tuberosum DM8.1, SLF11	88.4	F-box domain
SLF7	Chr_4	223591992	132673269-132672100	Solanum tuberosum DM8.1, SLF7	90.0	F-box domain
SLF13-2Ψ	Chr_4	223591992	134521474-134522652	Solanum tuberosum DM8.1, SLF13	86.2	-
S-RNase	Chr_4	223591992	144924380-144924610, 144924702-144925115	Solanum tuberosum MZ561411.1, SRNase-S8	78.9	Ribonuclease T2 family
SLF23	Chr_4	223591992	150859800-150858649	Solanum neorickii MG266233.1, SLF23	88.7	F-box domain
SLF21Ψ	Chr_4	223591992	151347322-151348514	Solanum tuberosum DM8.1, SLF21	86.1	-
SLF12	Chr_4	223591992	151479558-151480727	Solanum tuberosum DM8.1, SLF12	84.8	F-box domain
SLF5Ψ	Chr_4	223591992	156860559-156859412	Solanum tuberosum DM8.1, SLF5-2	88.5	-
SLF16Ψ	Chr_4	223591992	217681319-217682487	Solanum tuberosum DM8.1, SLF16	87.6	-
SLF15	Chr_4	223591992	219722367-219723626	Solanum tuberosum DM8.1, SLF15	86.8	F-box domain

Downloads

The Solanum wrightii S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_wrightii

Publications

Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008.