Description

Solanum vernei is a wild potato species native to Argentina and just barely reaching into Bolivia. Plants can reach a bit more than four feet tall. Purple flowers. Berries are small and light green. Stolons more than two feet long. Tubers are small, whitish, round to ovoid. This species can survive frosts down to 23 degrees F (-5 C) (Li 1977). Vega (1995) found that this species is more frost tolerant than domesticated potato.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum vernei

• Solanum vernei PG4036

S genes

Solanum vernei PG4036 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF15	atg0207	1813863	1311585-1310326	Solanum tuberosum DM8.1, SLF15	97.8	F-box domain
SLF16Ψ	atg0217	1363645	1166740-1165560	Solanum tuberosum DM8.1, SLF16	98.1	-
SLF19Ψ	atg0243	660683	598738-599851	Solanum tuberosum DM8.1, SLF19	94.8	-
SLF18	atg0243	660683	650484-649369	Solanum tuberosum DM8.1, SLF18	96.7	F-box domain
SLF9	hptg0026	18873238	1868760-1869902	Solanum tuberosum DM8.1, SLF9	98.1	F-box domain
SLF21	hptg0026	18873238	3715799-3717019	Solanum tuberosum DM8.1, SLF21	99.0	F-box domain
SLF20	hptg0026	18873238	4166940-4168106	Solanum tuberosum DM8.1, SLF20	99.4	F-box domain
SLF6Ψ	hptg0026	18873238	4214118-4215259	Solanum tuberosum DM8.1, SLF6	92.6	-
SLF7	hptg0026	18873238	4232987-4234156	Solanum tuberosum DM8.1, SLF7	97.9	F-box domain
SLF5	hptg0026	18873238	4335436-4336605	Solanum tuberosum DM8.1, SLF5-2	98.4	F-box domain
SLF5-2	hptg0026	18873238	4631012-4632190	Solanum tuberosum DM8.1, SLF5	92.0	F-box domain
SLF12	hptg0026	18873238	4840711-4839545	Solanum tuberosum DM8.1, SLF12	97.5	F-box domain
S-RNase	hptg0026	18873238	7040544-7040771, 7040885-7041313	Solanum tuberosum MZ561417.1, SRNase-S14	98.2	Ribonuclease T2 family
SLF6-2	hptg0026	18873238	7404283-7403138	Solanum lycopersicoides KU987626.1, SLF6	95.7	F-box domain
SLF17	hptg0026	18873238	8139353-8138172	Solanum tuberosum DM8.1, SLF17	97.7	F-box domain
SLF23	hptg0026	18873238	8200377-8199220	Solanum lycopersicoides KU960925.1, SLF23	94.7	F-box domain
SLF22	hptg0026	18873238	9042028-9043167	Solanum tuberosum DM8.1, SLF22	98.8	F-box domain
SLF22-2	hptg0026	18873238	11906785-11905646	Solanum tuberosum DM8.1, SLF22	98.6	F-box domain
SLF22-3	hptg0026	18873238	14475296-14474145	Solanum tuberosum DM8.1, SLF22-2	96.0	F-box domain
SLF17-2	hptg0026	18873238	15143257-15144423	Solanum tuberosum DM8.1, SLF17	97.3	F-box domain
S-RNase-2	hptg0026	18873238	15791129-15790893, 15790805-15790392	Solanum chacoense S69589.1, ScS11-RNase	98.8	Ribonuclease T2 family
SLF5-3	hptg0026	18873238	16857690-16856506	Solanum tuberosum DM8.1, SLF5	97.6	F-box domain
SLF12-2	hptg0026	18873238	16911643-16912809	Solanum tuberosum DM8.1, SLF12	98.7	F-box domain
SLF5-4	hptg0026	18873238	17232744-17231575	Solanum tuberosum DM8.1, SLF5-2	98.8	F-box domain
SLF7-2	hptg0026	18873238	17312197-17311028	Solanum tuberosum DM8.1, SLF7	97.6	F-box domain
SLF6-3Ψ	hptg0026	18873238	17334893-17333751	Solanum tuberosum DM8.1, SLF6	92.1	-
SLF20-2	hptg0026	18873238	17396330-17395164	Solanum tuberosum DM8.1, SLF20	99.2	F-box domain
SLF13	hptg0026	18873238	18035269-18036471	Solanum tuberosum DM8.1, SLF13	99.4	F-box domain
SLF6-4Ψ	hptg0026	18873238	18404114-18405264	Solanum tuberosum DM8.1, SLF6-2	95.3	-
SLF6-5Ψ	hptg0045	3301181	493306-492144	Solanum tuberosum DM8.1, SLF6-2	96.1	-
SLF13-2	hptg0045	3301181	829197-827989	Solanum tuberosum DM8.1, SLF13	98.7	F-box domain
SLF16-2Ψ	ptg0011	14523193	2024984-2023804	Solanum tuberosum DM8.1, SLF16	98.0	-
SLF15-2	ptg0013	5678831	4890249-4888990	Solanum tuberosum DM8.1, SLF15	97.8	F-box domain
SLF18-2	ptg0026	46081322	30246067-30244952	Solanum tuberosum DM8.1, SLF18	97.1	F-box domain
SLF21-2	ptg0026	46081322	42666311-42665091	Solanum tuberosum DM8.1, SLF21	99.0	F-box domain
SLF9-2	ptg0026	46081322	44365938-44364796	Solanum tuberosum DM8.1, SLF9	98.2	F-box domain

Downloads

The Solanum vernei S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_vernei

Publications

Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.