Description

Solanum stramoniifolium is a species of flowering plant from the genus Solanum. The species was originally described by Nikolaus Joseph von Jacquin in 1781.

This species is a suffrutescent herb, common in disturbed low-lands of the northern part of South America. The leaves closely resembles those of Solanum hirtum. It is shrub that can grow up to 2 m in height.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum stramoniifolium

• Solanum stramoniifolium gwh_assembly PI 487464 01

S genes

Solanum stramoniifolium gwh_assembly PI 487464 01 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF16Ψ	ptg000014l	54696289	52518498-52519666	Solanum tuberosum DM8.1, SLF16	87.6	-
SLF15	ptg000014l	54696289	54315251-54316369	Solanum lycopersicum SL2.31, SLF15	85.8	F-box domain
S-RNase	ptg000052l	60840350	9578784-9578551, 9578462-9578049	Solanum tuberosum MZ561414.1, SRNase-S11	85.9	Ribonuclease T2 family
SLF11	ptg000052l	60840350	14193281-14194450	Solanum tuberosum DM8.1, SLF11	88.4	F-box domain
SLF7	ptg000052l	60840350	16581257-16580088	Solanum tuberosum DM8.1, SLF7	89.7	F-box domain
SLF13	ptg000052l	60840350	18022093-18020915	Solanum tuberosum DM8.1, SLF13	85.9	F-box domain
SLF18	ptg000052l	60840350	58029291-58028179	Solanum tuberosum DM8.1, SLF18-2	88.0	F-box domain
SLF21	ptg000060l	12730208	11107550-11108764	Solanum tuberosum DM8.1, SLF21	86.5	F-box domain
SLF5	ptg000068l	10083157	5583832-5582672	Solanum tuberosum DM8.1, SLF5-2	87.6	F-box domain
SLF5-2	ptg000090l	7560583	1073442-1074602	Solanum tuberosum DM8.1, SLF5-2	87.8	F-box domain

Downloads

The Solanum stramoniifolium S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_stramoniifolium

Publications

Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008.