Solanum septemlobum
Overview
| Genus | Solanum |
| Species | septemlobum |
| Common Name | None |
| Abbreviation | S. septemlobum |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=24 |
| Genome Size | 950 Mb |
| Genome Assemblies | 1 |
| Cross Reference | NCBI taxon: 2753881 |
Organism Image
Description
The native range of this species is SE. Siberia to China. It is a scrambling shrub or liana and grows primarily in the temperate biome.
Whole Genomes
Whole Genome Sequences & Annotations for Solanum septemlobum
S genes
Solanum septemlobum gwh_assembly Zhangf0172 S genes
| Query | Chromosome | Size(bp) | Coordinates | BLASTn Hit | BLASTn %ID | Domain |
| SLF18 | GWHBKCE00000003 | 82998514 | 32998079-32999191 | Solanum tuberosum DM8.1, SLF18 | 89.9 | F-box |
| SLF4Ψ | GWHBKCE00000003 | 82998514 | 59871969-59870777 | Petunia inflata KJ670477.1, S3-SLF4 | 78.1 | - |
| SLF16Ψ | GWHBKCE00000003 | 82998514 | 78399234-78400414 | Solanum tuberosum DM8.1, SLF16 | 90.8 | - |
| SLF15 | GWHBKCE00000003 | 82998514 | 82247607-82246348 | Solanum tuberosum DM8.1, SLF15 | 91.1 | F-box |
Downloads
The Solanum septemlobum S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Solanum_septemlobum |
Publications
Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008.
© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences