Description

Solanum paucissectum is a wild potato from Peru. Plants are usually low-lying, sometimes as much as two feet tall. Flowers white to light blue. Berries small and ovoid.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum paucissectum

• Solanum paucissectum PG3022

S genes

Solanum paucissectum PG3022 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF19	PG3022_atg0027	7287718	2993113-2994228	Solanum tuberosum DM8.1, SLF19	97.0	F-box domain
SLF18	PG3022_atg0027	7287718	3026099-3024984	Solanum tuberosum DM8.1, SLF18	97.3	F-box domain
SLF22	PG3022_hptg0025	4446389	1621495-1620356	Solanum tuberosum DM8.1, SLF22	98.7	F-box domain
SLF23	PG3022_hptg0025	4446389	2594420-2595577	Solanum neorickii MG266233.1, SLF23	94.6	F-box domain
SLF17	PG3022_hptg0025	4446389	2658821-2659987	Solanum tuberosum DM8.1, SLF17	98.0	F-box domain
SLF13	PG3022_hptg0032	7544113	2338084-2339286	Solanum tuberosum DM8.1, SLF13	99.1	F-box domain
SLF6Ψ	PG3022_hptg0032	7544113	2864879-2865997	Solanum tuberosum DM8.1, SLF6-2	95.1	-
SLF11	PG3022_hptg0032	7544113	3588149-3589297	Solanum tuberosum DM8.1, SLF11	94.0	F-box domain
SLF9	PG3022_hptg0032	7544113	4946860-4948002	Solanum tuberosum DM8.1, SLF9	98.2	F-box domain
SLF21	PG3022_hptg0032	7544113	6522852-6524072	Solanum tuberosum DM8.1, SLF21	99.2	F-box domain
SLF20	PG3022_hptg0032	7544113	6942544-6943710	Solanum tuberosum DM8.1, SLF20	98.5	F-box domain
SLF6-2Ψ	PG3022_hptg0032	7544113	7019776-7020918	Solanum tuberosum DM8.1, SLF6	92.1	-
SLF7	PG3022_hptg0032	7544113	7027411-7028580	Solanum tuberosum DM8.1, SLF7	97.8	F-box domain
SLF5	PG3022_hptg0032	7544113	7068684-7069853	Solanum tuberosum DM8.1, SLF5-2	98.1	F-box domain
SLF4Ψ	PG3022_hptg0032	7544113	7164352-7165514	Solanum pennellii NM_001323453.1, SLF4	95.4	-
SLF12	PG3022_hptg0032	7544113	7378578-7377412	Solanum tuberosum DM8.1, SLF12	98.4	F-box domain
SLF5-2	PG3022_hptg0032	7544113	7398950-7400134	Solanum tuberosum DM8.1, SLF5	97.6	F-box domain
SLF19-2	PG3022_ptg0004	23639147	2825848-2826963	Solanum tuberosum DM8.1, SLF19	97.3	F-box domain
SLF18-2	PG3022_ptg0004	23639147	2858393-2857278	Solanum tuberosum DM8.1, SLF18	97.5	F-box domain
SLF13-2	PG3022_ptg0004	23639147	15676993-15678195	Solanum tuberosum DM8.1, SLF13	99.2	F-box domain
SLF6-3Ψ	PG3022_ptg0004	23639147	16151100-16152218	Solanum tuberosum DM8.1, SLF6-2	95.2	-
SLF9-2Ψ	PG3022_ptg0004	23639147	18663336-18664471	Solanum tuberosum DM8.1, SLF9	97.5	-
SLF12-2	PG3022_ptg0004	23639147	19584912-19586078	Solanum tuberosum DM8.1, SLF12	97.9	F-box domain
SLF5-3	PG3022_ptg0004	23639147	19916177-19915008	Solanum tuberosum DM8.1, SLF5-2	98.4	F-box domain
SLF7-2	PG3022_ptg0004	23639147	19974462-19973293	Solanum tuberosum DM8.1, SLF7	96.8	F-box domain
SLF6-4Ψ	PG3022_ptg0004	23639147	19991807-19990665	Solanum tuberosum DM8.1, SLF6	92.2	-
SLF20-2	PG3022_ptg0004	23639147	20067431-20066265	Solanum tuberosum DM8.1, SLF20	99.2	F-box domain
SLF21-2	PG3022_ptg0004	23639147	20803337-20804557	Solanum tuberosum DM8.1, SLF21	98.9	F-box domain
SLF15	PG3022_ptg0013	34287271	4575468-4574209	Solanum tuberosum DM8.1, SLF15	97.9	F-box domain
SLF16Ψ	PG3022_ptg0013	34287271	6393272-6392092	Solanum tuberosum DM8.1, SLF16	98.3	-
SLF22-2	PG3022_ptg0013	34287271	32521228-32520089	Solanum tuberosum DM8.1, SLF22	98.8	F-box domain
SLF17-2	PG3022_ptg0013	34287271	33639927-33638746	Solanum tuberosum DM8.1, SLF17	97.6	F-box domain
SLF23-2	PG3022_ptg0013	34287271	33696942-33695794	Solanum neorickii MG266239.1, SLF23	95.6	F-box domain

Downloads

The Solanum paucissectum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_paucissectum

Publications

Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.