Description

Solanum neorossii is a species found in northern Argentina, close to the Bolivian border. It was first described in 1983 from materials collected in 1966 (Hawkes 1983).

Whole Genomes

Whole Genome Sequences & Annotations for Solanum neorossii

• Solanum neorossii PG6243

S genes

Solanum neorossii PG6243 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF19Ψ	PG6243_atg0069	3024436	13512-12399	Solanum tuberosum DM8.1, SLF19	94.7	-
SLF13	PG6243_atg0117	3148926	2252836-2254038	Solanum tuberosum DM8.1, SLF13	99.1	F-box domain
SLF6Ψ	PG6243_atg0117	3148926	2576313-2577475	Solanum tuberosum DM8.1, SLF6-2	95.9	-
SLF16Ψ	PG6243_atg0130	1566287	1220451-1219271	Solanum tuberosum DM8.1, SLF16	98.3	-
SLF15	PG6243_atg0193	843018	719139-720398	Solanum tuberosum DM8.1, SLF15	97.5	F-box domain
SLF23	PG6243_hptg0007	4353470	1479853-1481010	Solanum neorickii MG266233.1, SLF23	94.0	F-box domain
SLF17	PG6243_hptg0007	4353470	1566602-1567783	Solanum tuberosum DM8.1, SLF17	97.8	F-box domain
SLF5	PG6243_hptg0007	4353470	1943229-1942039	Solanum tuberosum DM8.1, SLF5	95.7	F-box domain
SLF12	PG6243_hptg0007	4353470	1972988-1974154	Solanum tuberosum DM8.1, SLF12	97.7	F-box domain
SLF4Ψ	PG6243_hptg0007	4353470	2127281-2126119	Solanum pimpinellifolium KJ814871.1, SLF4	94.1	-
SLF5-2	PG6243_hptg0007	4353470	2306181-2307350	Solanum tuberosum DM8.1, SLF5-2	97.1	F-box domain
SLF7	PG6243_hptg0007	4353470	2359391-2358228	Solanum tuberosum DM8.1, SLF7	94.4	F-box domain
SLF9	PG6243_hptg0036	5338255	1842878-1844020	Solanum tuberosum DM8.1, SLF9	98.3	F-box domain
SLF21	PG6243_hptg0036	5338255	3362166-3363386	Solanum tuberosum DM8.1, SLF21	98.9	F-box domain
SLF20	PG6243_hptg0036	5338255	3894182-3895348	Solanum tuberosum DM8.1, SLF20	98.5	F-box domain
SLF6-2Ψ	PG6243_hptg0036	5338255	3954431-3955572	Solanum tuberosum DM8.1, SLF6	92.3	-
SLF7-2	PG6243_hptg0036	5338255	3976383-3977552	Solanum tuberosum DM8.1, SLF7	97.5	F-box domain
SLF5-3	PG6243_hptg0036	5338255	4048806-4049975	Solanum tuberosum DM8.1, SLF5-2	98.6	F-box domain
SLF4-2Ψ	PG6243_hptg0036	5338255	4127445-4128607	Solanum pennellii NM_001323453.1, SLF4	95.7	-
SLF12-2	PG6243_hptg0036	5338255	4332558-4331407	Solanum tuberosum DM8.1, SLF12	97.8	F-box domain
SLF5-4	PG6243_hptg0036	5338255	4373063-4374247	Solanum tuberosum DM8.1, SLF5	95.1	F-box domain
SLF17-2	PG6243_hptg0051	1987283	41759-40578	Solanum tuberosum DM8.1, SLF17	97.4	F-box domain
SLF23-2	PG6243_hptg0051	1987283	69424-68267	Solanum neorickii MG266239.1, SLF23	95.6	F-box domain
SLF18	PG6243_hptg0103	4223402	4204114-4205229	Solanum tuberosum DM8.1, SLF18	97.1	F-box domain
SLF21-2Ψ	PG6243_hptg0115	809055	395990-394771	Solanum tuberosum DM8.1, SLF21	97.5	-
SLF13-2	PG6243_ptg0030	9867509	8437000-8438202	Solanum tuberosum DM8.1, SLF13	98.9	F-box domain
SLF6-3Ψ	PG6243_ptg0030	9867509	8806296-8807446	Solanum tuberosum DM8.1, SLF6-2	95.4	-
SLF11Ψ	PG6243_ptg0030	9867509	9741482-9740332	Solanum tuberosum DM8.1, SLF11	94.6	-
SLF19-2Ψ	PG6243_ptg0044	7033214	3231600-3232707	Solanum tuberosum DM8.1, SLF19	97.2	-
SLF18-2	PG6243_ptg0044	7033214	3267552-3266443	Solanum tuberosum DM8.1, SLF18	97.5	F-box domain
SLF16-2Ψ	PG6243_ptg0045	11531901	6313847-6315027	Solanum tuberosum DM8.1, SLF16	98.6	-
SLF15-2	PG6243_ptg0045	11531901	8079052-8080311	Solanum tuberosum DM8.1, SLF15	97.9	F-box domain
SLF9-2	PG6243_ptg0064	1678696	708295-707153	Solanum tuberosum DM8.1, SLF9	98.7	F-box domain

Downloads

The Solanum neorossii S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_neorossii

Publications

Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.