Description

Solanum multiinterruptum is a wild potato species from northern Peru. Plants to about three and a half feet tall. Flowers blue/purple or white. Berries small and ovoid.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum multiinterruptum

• Solanum multiinterruptum PG4060

S genes

Solanum multiinterruptum PG4060 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF16Ψ	atg0003	1531079	651511-650331	Solanum tuberosum DM8.1, SLF16	97.9	-
SLF6	atg0149	6423479	2234112-2232970	Solanum tuberosum DM8.1, SLF6-2	95.2	F-box domain
SLF12Ψ	atg0149	6423479	2297166-2298330	Solanum pennellii NM_001323464.1, SLF12	94.2	-
SLF13	atg0149	6423479	2792830-2791628	Solanum tuberosum DM8.1, SLF13	98.2	F-box domain
SLF18	atg0347	2091747	1422540-1421431	Solanum tuberosum DM8.1, SLF18	96.8	F-box domain
SLF1	atg0758	277848	132247-133428	Solanum pennellii KJ814858.1, SLF1	91.6	F-box domain
S-RNase	hptg0013	1722284	372914-373147, 373228-373638	Solanum tuberosum MZ561405.1, SRNase-S2	96.4	Ribonuclease T2 family
SLF17	hptg0022	8370660	1933122-1934303	Solanum tuberosum DM8.1, SLF17	97.9	F-box domain
SLF1-2	hptg0022	8370660	3682839-3681658	Solanum pennellii KJ814858.1, SLF1	91.8	F-box domain
SLF1-3	hptg0066	2292031	153221-152040	Solanum pennellii KJ814858.1, SLF1	91.6	F-box domain
SLF23	hptg0066	2292031	423603-424769	Solanum neorickii MG266243.1, SLF23	95	F-box domain
SLF17-2	hptg0066	2292031	445719-446900	Solanum tuberosum DM8.1, SLF17	97.8	F-box domain
SLF21	hptg0098	2438763	442162-440942	Solanum tuberosum DM8.1, SLF21	96.3	F-box domain
SLF6-2Ψ	hptg0104	2642315	71478-72615	Solanum tuberosum DM8.1, SLF6	92.9	-
SLF7	hptg0104	2642315	78680-79843	Solanum tuberosum DM8.1, SLF7	95.6	F-box domain
SLF5	hptg0104	2642315	282235-283404	Solanum tuberosum DM8.1, SLF5-2	96.6	F-box domain
SLF4Ψ	hptg0104	2642315	500538-501703	Solanum pimpinellifolium KJ814871.1, SLF4	95.4	-
SLF12-2	hptg0104	2642315	722368-721202	Solanum tuberosum DM8.1, SLF12	96.3	F-box domain
S-RNase-2	hptg0122	464752	347295-347050, 346938-346513	Solanum chacoense AF232304.1, ScS14-RNase	99.3	Ribonuclease T2 family
SLF15	hptg0173	1075788	246572-247831	Solanum tuberosum DM8.1, SLF15	97.6	F-box domain
SLF15-2	ptg0018	21485827	3063867-3065126	Solanum tuberosum DM8.1, SLF15	97.7	F-box domain
SLF16-2Ψ	ptg0018	21485827	4303666-4302486	Solanum tuberosum DM8.1, SLF16	98	F-box domain
SLF5-2	ptg0028	52998247	1830953-1829763	Solanum tuberosum DM8.1, SLF5	97.6	F-box domain
SLF12-3	ptg0028	52998247	1858514-1859680	Solanum tuberosum DM8.1, SLF12	98.4	F-box domain
SLF5-3	ptg0028	52998247	2067773-2066604	Solanum tuberosum DM8.1, SLF5-2	98.1	F-box domain
SLF7-2	ptg0028	52998247	2102469-2101306	Solanum tuberosum DM8.1, SLF7	95.4	F-box domain
SLF6-3Ψ	ptg0028	52998247	2109654-2108512	Solanum tuberosum DM8.1, SLF6	93.1	-
SLF20	ptg0028	52998247	2173098-2171932	Solanum tuberosum DM8.1, SLF20	96.8	F-box domain
SLF21-2	ptg0028	52998247	2610861-2609641	Solanum tuberosum DM8.1, SLF21	96.6	F-box domain
SLF6-4	ptg0028	52998247	7138408-7137266	Solanum tuberosum DM8.1, SLF6-2	95.2	F-box domain
SLF12-4Ψ	ptg0028	52998247	7195468-7196632	Solanum pennellii NM_001323464.1, SLF12	94.2	-
SLF13-2	ptg0028	52998247	7707718-7706516	Solanum tuberosum DM8.1, SLF13	98.2	F-box domain
SLF18-2	ptg0028	52998247	23500167-23501282	Solanum tuberosum DM8.1, SLF18	96.2	F-box domain
SLF19	ptg0028	52998247	23560163-23559093	Solanum tuberosum DM8.1, SLF19	95	F-box domain

Downloads

The Solanum multiinterruptum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Solanum_multiinterruptum

Publications

Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.