Solanum morelliforme

Overview

Genus Solanum
Species morelliforme
Common Name Wild potato
Abbreviation S. morelliforme
Ploidy Diploid
Chromosome Number 2n=2x=24
Genome Size 830 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 317827

Organism Image

Description

Solanum morelliforme is a contender for the most unusual wild potato, as it is an epiphyte, typically growing on or near oak and pine trees. This is a widespread species in central Mexico and extends south into Honduras. Plants grow from about 3 to 18 inches tall. The berries are very small – about 1/4 to 1/3 of an inch in diameter and contain only 5 to 15 seeds, much less than most potato species.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum morelliforme

S genes

Solanum morelliforme PG1011 S genes

QueryContigSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF19PG1011_ptg001924517580445191-446306Solanum tuberosum DM8.1, SLF1995.2F-box domain
SLF18PG1011_ptg001924517580477687-476578Solanum tuberosum DM8.1, SLF1895F-box domain
SLF14ΨPG1011_ptg00192451758011072256-11073400Solanum habrochaites KJ814931.1, SLF1488.3-
SLF13ΨPG1011_ptg00192451758013511931-13513130Solanum tuberosum DM8.1, SLF1395.6-
SLF11ΨPG1011_ptg00192451758015014837-15013666Solanum tuberosum DM8.1, SLF1195.1-
SLF21PG1011_ptg00192451758019847783-19848997Solanum tuberosum DM8.1, SLF2195.7F-box domain
SLF20ΨPG1011_ptg00192451758020082629-20083795Solanum tuberosum DM8.1, SLF2097.3-
SLF12ΨPG1011_ptg00192451758020700634-20699466Solanum tuberosum DM8.1, SLF1296-
SLF16ΨPG1011_ptg0042388602089744-90924Solanum tuberosum DM8.1, SLF1697.9-
SLF15PG1011_ptg00423886020784358-783099Solanum tuberosum DM8.1, SLF1597F-box domain

Downloads

The Solanum morelliforme S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Solanum_morelliforme

Publications

Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences