Solanum corneliomulleri

Overview

Genus Solanum
Species corneliomulleri
Common Name -
Abbreviation S. corneliomulleri
Ploidy Diploid
Chromosome Number 2n=2x=24
Genome Size 877 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 230663

Organism Image

Description

Solanum corneliomulleri is a very distinctive species, with its strongly curved anther tube and copious glandular pubescence interspersed with very long uniseriate trichomes that are usually gland-tipped. Rick (1986a) included it in his broadly defined S. peruvianum (as Lycopersicon peruvianum), based on its ability to interbreed with S. peruvianum s.s. and S. arcanum as defined here. The table lists all the TGRC accessions (LA numbers) previously included in Rick’s broad definition of S. peruvianum with their current identification according to this monograph. Populations of S. corneliomulleri from the region of Volcán Misti (Yura and Tingo) in the Department of Arequipa (e.g. Schmidt s.n., F) are distinct in having narrower leaflets, shorter pubescence and extremely long calyx lobes in fruit that enclose the berry like a cage.

Whole Genomes

Whole Genome Sequences & Annotations for Solanum corneliomulleri

S genes

Solanum corneliomulleri 'ZY62 (cultivar)' ASM2770480v1 S genes

QueryChrSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF15Chr0186881263Chr01:2276209-2274950Solanum lycopersicum SL2.31, SLF1595.6F-box domain
SLF16Chr0186881263Chr01:2697300-2696119Solanum lycopersicum SL2.31, SLF1698.6F-box domain
SLF14Chr0186881263Chr01:19277346-19278515Solanum pennellii BK009220.1, SLF1497.9F-box domain
SLF4ΨChr0186881263Chr01:20788803-20789969Solanum peruvianum KJ814848.1, SLF497.8-
SLF6Chr0186881263Chr01:20884765-20883620Solanum chilense KJ814885.1, SLF698.5F-box domain
SLF23ΨChr0186881263Chr01:21478233-21479391Solanum pennellii BK009221.1, SLF2397.7-
SLF22Chr0186881263Chr01:24969854-24968721Solanum pennellii BK009218.1, SLF2298.9F-box domain
SLF13Chr0186881263Chr01:51496032-51494830Solanum peruvianum KJ814856.1, SLF1399.6F-box domain
SLF14-2ΨChr0186881263Chr01:54024738-54023556Solanum habrochaites KJ814931.1, SLF1495.8-
SLF14-3ΨChr0186881263Chr01:54038354-54037173Solanum pennellii KJ814941.1, SLF1496.7-
SLF18ΨChr0186881263Chr01:64319924-64318810Solanum lycopersicum SL2.31, SLF1898.3-
SLF18-2ΨChr0186881263Chr01:64325789-64324678Solanum lycopersicum SL2.31, SLF1897.9-
SLF19Chr0186881263Chr01:64374392-64373283Solanum lycopersicum SL2.31, SLF1997.5F-box domain

Downloads

The Solanum corneliomulleri S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Solanum_corneliomulleri

Publications

Li N, He Q, Wang J, Wang B, Zhao J, Huang S, Yang T, Tang Y, Yang S, Aisimutuola P, Xu R, Hu J, Jia C, Ma K, Li Z, Jiang F, Gao J, Lan H, Zhou Y, Zhang X, Huang S, Fei Z, Wang H, Li H, Yu Q. Super-pangenome analyses highlight genomic diversity and structural variation across wild and cultivated tomato species. Nat Genet. 2023 May;55(5):852-860. doi: 10.1038/s41588-023-01340-y.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences