Genus | Solanum |
Species | buesii |
Common Name | Atoc papa, Machu papa, Papa del monte, Jaracca |
Abbreviation | S. buesii |
Ploidy | Diploid |
Chromosome Number | 2n=2x=24 |
Genome Size | 750 Mb |
Genome Assemblies | 1 |
Cross Reference | NCBI taxon: 856885 |
Organism Image
Solanum buesii is found in the Ceja de Montana of Peru, at 7,900 to 11,800 feet (2400 to 3600 m), a region characterized by relatively warm and humid temperatures.
The specific epithet, buesii, honors German agronomist Christian Bues. While there is no completely standardized pronunciation for scientific names, the most common way to pronounce this species is probably so-LAY-num BOOS-ee-eye.
Tall plants, reaching 2-3 feet and occasionally much taller. Leaves are narrow. Flowers blue. Fruits long and narrow. Tubers small and whitish.
Solanum buesii PG4041 S genes
Query | Contig | Size(bp) | Coordinates | BLASTn Hit | BLASTn %ID | Domain |
SLF11Ψ | atg0031 | 1743861 | 247216-246063 | Solanum tuberosum DM8.1, SLF11 | 97.9 | - |
SLF16 | atg0091 | 1762159 | 1485489-1486669 | Solanum tuberosum DM8.1, SLF16 | 99.3 | F-box domain |
SLF13 | atg0182 | 3543038 | 2354841-2356043 | Solanum tuberosum DM8.1, SLF13 | 99.1 | F-box domain |
SLF6Ψ | atg0182 | 3543038 | 2995402-2996548 | Solanum tuberosum DM8.1, SLF6-2 | 97.7 | - |
SLF15 | atg0190 | 1478436 | 1322660-1323919 | Solanum tuberosum DM8.1, SLF15 | 99.8 | F-box domain |
SLF19 | atg0230 | 3184165 | 1221360-1222475 | Solanum tuberosum DM8.1, SLF19 | 97.0 | F-box domain |
SLF18 | atg0230 | 3184165 | 1253894-1252779 | Solanum tuberosum DM8.1, SLF18-2 | 97.1 | F-box domain |
SLF18-2 | atg0230 | 3184165 | 1262832-1261717 | Solanum tuberosum DM8.1, SLF18 | 98.1 | F-box domain |
SLF9 | atg0523 | 133017 | 103135-104277 | Solanum tuberosum DM8.1, SLF9 | 98.9 | F-box domain |
SLF1Ψ | hptg0006 | 2792595 | 608894-607713 | Solanum pennellii KJ814858.1, SLF1 | 90.8 | - |
SLF12 | hptg0006 | 2792595 | 680492-681658 | Solanum tuberosum DM8.1, SLF12 | 96.6 | F-box domain |
SLF5 | hptg0006 | 2792595 | 819527-818358 | Solanum tuberosum DM8.1, SLF5-2 | 98.5 | F-box domain |
SLF7 | hptg0006 | 2792595 | 885138-883969 | Solanum tuberosum DM8.1, SLF7 | 98.8 | F-box domain |
SLF20 | hptg0006 | 2792595 | 946383-945217 | Solanum tuberosum DM8.1, SLF20 | 98.5 | F-box domain |
SLF21 | hptg0006 | 2792595 | 1405825-1404605 | Solanum tuberosum DM8.1, SLF21 | 99.3 | F-box domain |
SLF9-2 | hptg0017 | 9387267 | 51772-50630 | Solanum tuberosum DM8.1, SLF9 | 99.2 | F-box domain |
SLF22 | hptg0017 | 9387267 | 2004600-2005739 | Solanum tuberosum DM8.1, SLF22 | 99.4 | F-box domain |
SLF5-2 | hptg0022 | 1764622 | 354211-355395 | Solanum tuberosum DM8.1, SLF5 | 94.4 | F-box domain |
SLF17 | hptg0022 | 1764622 | 1415587-1414406 | Solanum tuberosum DM8.1, SLF17 | 97.5 | F-box domain |
SLF23 | hptg0022 | 1764622 | 1441589-1440441 | Solanum neorickii MG266239.1, SLF23 | 95.0 | F-box domain |
SLF22-2 | hptg0043 | 3579907 | 2180760-2179623 | Solanum tuberosum DM8.1, SLF22 | 99.3 | F-box domain |
SLF12-2 | hptg0047 | 2858573 | 83939-85105 | Solanum tuberosum DM8.1, SLF12 | 98.1 | F-box domain |
SLF5-3 | hptg0047 | 2858573 | 196634-195465 | Solanum tuberosum DM8.1, SLF5-2 | 98.1 | F-box domain |
SLF7-2 | hptg0047 | 2858573 | 424901-423732 | Solanum tuberosum DM8.1, SLF7 | 96.0 | F-box domain |
SLF20-2 | hptg0047 | 2858573 | 546947-545781 | Solanum tuberosum DM8.1, SLF20 | 98.1 | F-box domain |
SLF21-2 | hptg0047 | 2858573 | 964469-963249 | Solanum tuberosum DM8.1, SLF21 | 99.2 | F-box domain |
SLF5-4Ψ | hptg0134 | 1705916 | 1033902-1032717 | Solanum tuberosum DM8.1, SLF5 | 96.1 | - |
S-RNase | hptg0134 | 1705916 | 1263000-1262755,1262642-1262217 | Solanum tuberosum MZ561404.1,S-RNase 1 | 99.9 | Ribonuclease T2 family |
SLF19-2 | ptg0017 | 44737474 | 29687590-29688705 | Solanum tuberosum DM8.1, SLF19 | 97.0 | F-box domain |
SLF18-3 | ptg0017 | 44737474 | 29720134-29719019 | Solanum tuberosum DM8.1, SLF18-2 | 96.1 | F-box domain |
SLF18-4 | ptg0017 | 44737474 | 29729067-29727952 | Solanum tuberosum DM8.1, SLF18 | 98.1 | F-box domain |
SLF13-2 | ptg0017 | 44737474 | 44159843-44161045 | Solanum tuberosum DM8.1, SLF13 | 99.3 | F-box domain |
SLF6-2Ψ | ptg0017 | 44737474 | 44527556-44528683 | Solanum tuberosum DM8.1, SLF6-2 | 96.2 | - |
SLF11-2Ψ | ptg0018 | 1826854 | 548367-549520 | Solanum tuberosum DM8.1, SLF11 | 98.0 | - |
SLF23-2 | ptg0023 | 1916968 | 441005-442153 | Solanum neorickii MG266239.1, SLF23 | 96.2 | F-box domain |
SLF17-2 | ptg0023 | 1916968 | 473969-475150 | Solanum tuberosum DM8.1, SLF17 | 97.7 | F-box domain |
SLF15-2 | ptg0025 | 16507360 | 3565798-3564539 | Solanum tuberosum DM8.1, SLF15 | 97.7 | F-box domain |
SLF16-2 | ptg0025 | 16507360 | 5050596-5049416 | Solanum tuberosum DM8.1, SLF16 | 99.3 | F-box domain |
The Solanum buesii S gene sequences are available in FASTA format.
CDS and Protein (FASTA file) | S-gene_Solanum_buesii |
Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Genome evolution and diversity of wild and cultivated potatoes. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x.