Petunia integrifolia subsp. inflata
Overview
| Genus | Petunia |
| Species | integrifolia |
| Common Name | Violet-flowered petunia |
| Abbreviation | P. integrifolia |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=14 |
| Genome Size | 1400 Mb |
| Genome Assemblies | 1 |
| Cross Reference | NCBI taxon: 212142 |
Organism Image
Description
Petunia inflata is a species of flowering plant in the family Solanaceae, native to Paraguay, northeastern Argentina, and southern Brazil. It is a member of the Petunia integrifolia clade, and is one of the parents of the garden petunia, Petunia × atkinsiana (formerly Petunia × hybrida). It is also widely used in laboratory studies of the S-RNase mechanism of self-incompatibility in plants.
Whole Genomes
Whole Genome Sequences & Annotations for Petunia integrifolia subsp. inflata
S genes
Petunia integrifolia subsp. inflata 'S6 (cultivar)' v1.0.1 S genes
| Query | Chromosome | Size(bp) | Coordinates | BLASTp Hit | BLASTp %ID | Domain |
| SLF1-1 | Peinf101Scf01751 | 453812 | 144926-146092 | AIK66522, S6a-SLF1 | 99 | F-box domain |
| SLF1-2 | Peinf101Scf01976 | 214490 | 4800-5969 | ADD21612, S1-SLF1 | 95 | F-box domain |
| SLF2-1 | Peinf101Scf01973 | 296567 | 278634-279788 | AIK66498, S3-SLF2 | 90 | F-box domain |
| SLF2-2 | Peinf101Scf01991 | 197077 | 154695-153541 | BAQ19037, Sm-SLF2 | 83 | F-box domain |
| SLF3 | Peinf101Scf01923 | 159365 | 5575-6753 | BAQ18957, S10-SLF3 | 96 | F-box domain |
| SLF4-1 | Peinf101Scf00922 | 184426 | 65244-64033 | BAJ24865, S7-SLF4 | 96 | F-box domain |
| SLF4-2 | Peinf101Scf05340 | 224001 | 129825-131051 | BAJ24865, S7-SLF4 | 93 | F-box domain |
| SLF5-1 | Peinf101Scf01516 | 657630 | 644401-645570 | BAQ19039, Sm-SLF5 | 96 | F-box domain |
| SLF5-2 | Peinf101Scf01646 | 115327 | 3200-4369 | BAQ19039, Sm-SLF5 | 96 | F-box domain |
| SLF6-1 | Peinf101Scf01506 | 144469 | 61311-62492 | BAJ24881, S19-SLF6 | 95 | F-box domain |
| SLF6-2 | Peinf101Scf00996 | 461697 | 108195-107014 | BAJ24881, S19-SLF6 | 96 | F-box domain |
| SLF7-1 | Peinf101Scf00080 | 221173 | 5071-3893 | ABX82526, S2-SLFLa | 99 | F-box domain |
| SLF7-2 | Peinf101Scf00526 | 752603 | 260882-259704 | BAQ18970, S11-SLF7 | 98 | F-box domain |
| SLF7-3Ψ | Peinf101Scf01586 | 859704 | 334991-336167 | BAQ19025, S0m-SLF7 | 79 | - |
| SLF8-1 | Peinf101Scf01751 | 453812 | 50755-51939 | BAQ18935, S7-SLF8 | 97 | F-box domain |
| SLF8-2 | Peinf101Scf03408 | 108618 | 69122-70303 | BAQ18935, S7-SLF8 | 88 | F-box domain |
| SLF9-1 | Peinf101Scf01995 | 82553 | 63281-62151 | BAQ18945, S9-SLF9 | 97 | F-box domain |
| SLF9-2 | Peinf101Scf01799 | 514228 | 141373-140243 | BAQ18945, S9-SLF9 | 98 | F-box domain |
| SLF10 | Peinf101Scf01608 | 234268 | 115426-116565 | AAR15915, S2-A134 | 99 | F-box domain |
| SLF11-1 | Peinf101Scf04466 | 242965 | 204665-205837 | AIK66454, S6a-SLF11 | 99 | F-box domain |
| SLF11-2 | Peinf101Scf00431 | 165049 | 14066-15178 | BAQ18974, S11-SLF11 | 95 | F-box domain |
| SLF12-1 | Peinf101Scf01976 | 214490 | 142523-143704 | AIK66458, S6a-SLF12 | 100 | F-box domain |
| SLF13-1 | Peinf101Scf01216 | 514760 | 360226-361392 | AIK66464, S6a-SLF13 | 99 | F-box domain |
| SLF13-2 | Peinf101Scf02268 | 142811 | 123095-121932 | BAQ19014, S22-SLF13 | 96 | F-box domain |
| SLF14-1 | Peinf101Scf01646 | 115327 | 30658-31851 | AIK66469, S6a-SLF14 | 99 | F-box domain |
| SLF14-2 | Peinf101Scf01246 | 26952 | 7324-6131 | AIK66469, S6a-SLF14 | 99 | F-box domain |
| SLF15-1 | Peinf101Scf16932 | 4714 | 563-1723 | AIK66475, S12-SLF15 | 96 | F-box domain |
| SLF16-1 | Peinf101Scf01216 | 514760 | 216155-214995 | AIK66479, S6a-SLF16 | 100 | F-box domain |
| SLF16-2 | Peinf101Scf01586 | 859704 | 501814-502983 | BAQ18940, S7-SLF16 | 77 | F-box domain |
| SLF17 | Peinf101Scf00041 | 2522227 | 1710310-1711476 | BAQ18941, S7-SLF17 | 99 | F-box domain |
| S6-RNase | Peinf101Scf01010 | 272190 | 153855-154091,154196-154627 | Q40875, S3-RNase | 91 | Ribonuclease T2 family |
Downloads
The Petunia inflata S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Petunia_inflata |
Publications
Bombarely, A., Moser, M., Amrad, A. et al. Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nature Plants 2, 16074 (2016). https://doi.org/10.1038/nplants.2016.74