Description

Nicotiana otophora is a perennial herbaceous plant. It is a wild species of tobacco native to the Andes Mountains of Bolivia and Argentina.

Whole Genomes

Whole Genome Sequences & Annotations for Nicotiana otophora

• Nicotiana otophora Noto

S genes

Nicotiana otophora Noto S genes

Query	Scaffold	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF-1	AWOL01S0008085.1	112210	39909-38731	Nicotiana alata EF420256.1, NaDD6-S2	92.6	F-box domain
SLF-2	AWOL01S0009934.1	119699	54847-56016	Nicotiana alata EF420255.1, NaDD5-S2	87.7	F-box domain
SLF-3	AWOL01S0013543.1	24873	18077-19252	Nicotiana alata EF420253.1, NaDD3-S1	89.8	F-box domain
S-RNase	AWOL01S0016020.1	154175	60399-60635, 60749-61177	Solanum tuberosum MZ561409.1, SRNase-S6	81.6	Ribonuclease T2 family
SLF-4	AWOL01S0016020.1	154175	103627-102485	Nicotiana alata EF420253.1, NaDD3-S1	90.0	F-box domain
SLF-5	AWOL01S0026916.1	147178	134176-135345	Nicotiana alata EF420255.1, NaDD5-S2	89.0	F-box domain
S-RNase-2	AWOL01S0045891.1	62207	54073-54312, 54414-54842	Petunia inflata M67990.2, PiS1-RNase	86.4	Ribonuclease T2 family

Downloads

The Nicotiana otophora S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Nicotiana_otophora

Publications

Sierro N, Battey JN, Ouadi S, Bakaher N, Bovet L, Willig A, Goepfert S, Peitsch MC, Ivanov NV. The tobacco genome sequence and its comparison with those of tomato and potato. Nat Commun. 2014 May 8;5:3833. doi: 10.1038/ncomms4833.