Nicotiana longiflora

Overview

Genus Nicotiana
Species longiflora
Common Name Long-flowered tobacco
Abbreviation N. longiflora
Ploidy Diploid
Chromosome Number -
Genome Size 2260 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 118702

Organism Image

Description

Nicotiana longiflora, the longflower tobacco or long-flowered tobacco, is a species of tobacco native to South America that is sometimes cultivated for its tubular flowers that emit a very sweet odour at night.

This plant has been a significant source of disease resistance in flue-cured and burley tobacco. Some of the disease impacted by resistance from this species are: black shank, cyst nematode, root-knot nematode, and wildfire. The resistance form N. longiflora imparts near immunity to race 0 black shank, but no resistance to race 1. One of the varieties still in use today is 14 x L8, the second most popular burley tobacco variety in the U.S.

Whole Genomes

Whole Genome Sequences & Annotations for Nicotiana longiflora

S genes

Nicotiana longiflora gwh_assembly 2420 S genes

QueryContigSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF4GWHBKBH0000009014012405549195-550391Petunia hybrida, S9-SLF480.0 F-box domain
SLF-1GWHBKBH00000090140124052486930-2488075Nicotiana alata EF420251.1, NaDD1-S190.8 F-box domain
SLF-2GWHBKBH00000090140124053653478-3652312Nicotiana alata EF420254.1, NaDD4-S298.5 F-box domain
SLF13GWHBKBH00000090140124054669355-4668192Petunia hybrida AB933009.1, S10-SLF1382.6 F-box domain

Downloads

The Nicotiana longiflora S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Nicotiana_longiflora

Publications

Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences