Mandragora caulescens

Overview

Genus Mandragora
Species caulescens
Common Name Himalayan mandrake
Abbreviation M. caulescens
Ploidy Diploid
Chromosome Number 2n = 48
Genome Size 750 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 337183

Organism Image

Description

Mandragora caulescens, the Himalayan mandrake, is a perennial herbaceous plant in the family Solanaceae, native to the Himalayas and mountainous regions of Myanmar and south-west China. One of the differences from the other species of Mandragora is that it has a stem, whereas they are stemless. Like all species of Mandragora, it contains tropane alkaloids, making it toxic. It is used in traditional Chinese medicine.

Whole Genomes

Whole Genome Sequences & Annotations for Mandragora caulescens

S genes

Mandragora caulescens S genes

QueryChromosomeSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF18Chr10286710299671724-9672839Solanum tuberosum DM8.1, SLF18-283.7 F-box domain
SLF15Chr172526206018785245-18783980Solanum tuberosum DM8.1, SLF1584.0 F-box domain

Downloads

The Mandragora caulescens S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Mandragora_caulescens

Publications

Yang J, Wu Y, Zhang P, Ma J, Yao YJ, Ma YL, Zhang L, Yang Y, Zhao C, Wu J, Fang X, Liu J. Multiple independent losses of the biosynthetic pathway for two tropane alkaloids in the Solanaceae family. Nat Commun. 2023 Dec 20;14(1):8457. doi: 10.1038/s41467-023-44246-3.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences