Datura inoxia

Overview

Genus Datura
Species inoxia
Common Name Downy thorn-apple
Abbreviation D. inoxia
Ploidy Diploid
Chromosome Number 2n = 24
Genome Size 2080 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 4075

Organism Image

Description

Datura innoxia (often spelled inoxia), known as pricklyburr, recurved thorn-apple, downy thorn-apple, Indian-apple, lovache, moonflower, nacazcul, toloatzin, toloaxihuitl, tolguache or toloache, is a species of flowering plant in the family Solanaceae. It is more rarely called sacred datura, a common name which is applied more often to the closely related Datura wrightii. It is native to the Southwestern United States, Central and South America, and introduced in Africa, Asia, Australia and Europe. The scientific name is often cited as D. innoxia. When English botanist Philip Miller first described the species in 1768, he misspelled the Latin word innoxia (inoffensive) when naming it D. inoxia. The name Datura meteloides was for some time erroneously applied to some members of the species, but that name has now been abandoned.

Whole Genomes

Whole Genome Sequences & Annotations for Datura inoxia

S genes

Datura inoxia gwh_assembly Yanglm0440 S genes

QueryChromosomeSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF15GWHBJWV000000091569429023335037-3336314Solanum lycopersicum SL2.31, SLF1581.9 F-box domain
SLF16GWHBJWV000000091569429024075621-4074452Solanum tuberosum DM8.1, SLF1684.4 F-box domain
SLF18GWHBJWV00000009156942902100649037-100650173Solanum tuberosum DM8.1, SLF18-285.9 F-box domain

Downloads

The Datura inoxia S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Datura_inoxia

Publications

Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences