| Analysis Name | Rosa rugosa drRosRugo1.1 Assembly & Annotation |
| Sequencing technology | PacBio,Arima2 |
| Assembly method | various |
| Release Date | 2023-07-18 |
NCBI BioProject PRJEB64184. Rosa rugosa genome assembly, drRosRugo1.
Assembly statistics
| Genome size | 417.1 Mb |
| Total ungapped length | 416.9 Mb |
| Number of chromosomes | 7 |
| Number of organelles | 0 |
| Number of scaffolds | 77 |
| Scaffold N50 | 58.2 Mb |
| Scaffold L50 | 4 |
| Number of contigs | 1,091 |
| Contig N50 | 653.7 kb |
| Contig L50 | 202 |
| GC percent | 39.5 |
| Genome coverage | 54.0x |
| Assembly level | Chromosome |
The Rosa rugosa drRosRugo1.1 Assembly file is available in FASTA format.
Downloads
| Chromosomes (FASTA file) | GCA_958449725.1_drRosRugo1.1_genomic.fna.gz |
The Rosa rugosa drRosRugo1.1 genome gene prediction files are not available.
Downloads
| Genes (GFF3 file) | - |
| CDS sequences (FASTA file) | - |
| Protein sequences (FASTA file) | - |
Functional annotation for the Rosa rugosa drRosRugo1.1 is not available.
Downloads
| Domain from InterProScan | - |
Rosa S genes Nucleotide
Rosa S genes Protein