Tripidium rufipilum

Overview

Genus Tripidium
Species rufipilum
Common Name -
Abbreviation T. rufipilum
Ploidy Diploid
Chromosome Number 2n=2x=20
Genome Size 858.7 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 908848

Description

Tripidium rufipilum is a species of monocot in the family Poaceae (grass family).

Whole Genomes

Whole Genome Sequences & Annotations for Tripidium rufipilum

S genes

Tripidium rufipilum S genes

QueryChromosomeSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247I-SΨChr107248043839869826-39870854Pvaginatum69DUF247
DUF247II-ZChr067706317270685228-70686853Orufipogon54DUF247
HPS10-ZChr067706317270682230-70682342,70682532-70682661Lperrieri44-

Downloads

The Tripidium rufipilum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Tripidium_rufipilum

Publications

Wang T, Wang B, Hua X, Tang H, Zhang Z, Gao R, Qi Y, Zhang Q, Wang G, Yu Z, Huang Y, Zhang Z, Mei J, Wang Y, Zhang Y, Li Y, Meng X, Wang Y, Pan H, Chen S, Li Z, Shi H, Liu X, Deng Z, Chen B, Zhang M, Gu L, Wang J, Ming R, Yao W, Zhang J. A complete gap-free diploid genome in Saccharum complex and the genomic footprints of evolution in the highly polyploid Saccharum genus. Nat Plants. 2023 Apr;9(4):554-571. doi: 10.1038/s41477-023-01378-0.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences