Description

Sporobolus pyramidalis is a species of grass native to Africa and Yemen. It does not have a distinct established English name, but it is one of the two species of giant rat's tail grasses. It has become a weed in eastern Australia.

Whole Genomes

Whole Genome Sequences & Annotations for Sporobolus pyramidalis

• Sporobolus pyramidalis v1

S genes

Sporobolus pyramidalis v1 S genes

Query	Scaffold	Size(bp)	Coordinates	tBLASTn Hit	tBLASTn %ID	Domain
DUF247I-SΨ	Scaffold2478	50380511	17826504-17827964	Cpurpureus	64	DUF247
DUF247II-S1	Scaffold15	27854210	9982614-9984242	CgayanaS2	59	DUF247
DUF247II-S2	Scaffold2517	55288354	40178084-40179694	CgayanaS2	59	DUF247
HPS10-S	Scaffold2478	50380511	17843191-17843326, 17843445-17843563	SspontaneumS2	80	-
DUF247I-Z1	Scaffold48	8247102	3167908-3169509	LpZDUF247-I_chromosome2	61	DUF247
DUF247I-Z2	Scaffold48	8247102	3715774-3717381	LpZDUF247-I_chromosome2	61	DUF247
DUF247II-Z1Ψ	Scaffold6	15334402	114029-114274	Eindica	69	DUF247
DUF247II-Z2	Scaffold48	8247102	3709712-3711340	Eindica	80	DUF247
HPS10-Z1	Scaffold6	15334402	121291-121480, 121561-121664	AerianthaHPS10-Z	71	-
HPS10-Z2	Scaffold48	8247102	3713514-3713598, 3713811-3713917	CsongoricaZ2	41	-

Downloads

The Sporobolus pyramidalis S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Sporobolus_pyramidalis

Publications

Chávez Montes RA, Haber A, Pardo J, Powell RF, Divisetty UK, Silva AT, Hernández-Hernández T, Silveira V, Tang H, Lyons E, Herrera Estrella LR, VanBuren R, Oliver MJ. A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species. Proc Natl Acad Sci U S A. 2022 Feb 1;119(5):e2118886119. doi: 10.1073/pnas.2118886119.