Panicum hallii

Overview

Genus Panicum
Species hallii
Common Name Hall's panicgrass
Abbreviation P. hallii
Ploidy Diploid
Chromosome Number 2n=2x=18
Genome Size 484.6 Mb
Genome Assemblies 2
Cross Reference NCBI taxon: 206008

Description

Panicum hallii, commonly known as Hall's panicgrass, is a perennial bunch grass in the genus Panicum which is native to the south/southwestern regions of the United States, and into southern Mexico.

Whole Genomes

Whole Genome Sequences & Annotations for Panicum hallii

S genes

Panicum hallii PHallii_v3.1 S genes

QueryChromosomeSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
HPS10-SNC_038045.15291301831707928-31708072,31708170-31708276ShybridS157-

Downloads

The Panicum hallii S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Panicum_hallii

Publications

Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, Gordon SP, Gould BA, Khasanova A, Lipzen A, MacQueen A, Palacio-Mejía JD, Plott C, Shakirov EV, Shu S, Yoshinaga Y, Zane M, Kudrna D, Talag JD, Rokhsar D, Grimwood J, Schmutz J, Juenger TE. The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nat Commun. 2018 Dec 6;9(1):5213. doi: 10.1038/s41467-018-07669-x.

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