| Genus | Oryza |
| Species | rhizomatis |
| Common Name | Wild rice (CC-genome) |
| Abbreviation | O. rhizomatis |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=24 |
| Genome Size | 559 Mb |
| Genome Assemblies | 1 |
| Cross Reference | NCBI taxon: 65491 |
Oryza rhizomatis is a species of monocot in the family Poaceae (grass family).
Oryza rhizomatis v1.0 S genes
| Query | Scaffold | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
| DUF247I-SΨ | scaffold7108 | 22821 | 15723-16034 | Obrachyantha | 51 | DUF247 |
| DUF247II-SΨ | scaffold7108 | 22821 | 2492-2954 | Onivara | 83 | DUF247 |
| HPS10-S | scaffold7108 | 22821 | 4967-5069,5171-5316 | LpsS_chromosome1 | 47 | - |
| DUF247II-ZΨ | scaffold1382 | 102645 | 11024-11245 | LrDUF247II-Z | 65 | DUF247 |
| HPS10-Z | scaffold1382 | 102645 | 14748-14800,15029-15089 | LpsZ_chromosome2 | 67 | - |
The Oryza rhizomatis S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Oryza_rhizomatis |
Shenton M, Kobayashi M, Terashima S, Ohyanagi H, Copetti D, Hernández-Hernández T, Zhang J, Ohmido N, Fujita M, Toyoda A, Ikawa H, Fujiyama A, Furuumi H, Miyabayashi T, Kubo T, Kudrna D, Wing R, Yano K, Nonomura KI, Sato Y, Kurata N. Evolution and Diversity of the Wild Rice Oryza rhizomatis Complex, across Continents, Genome Types, and Ploidy Levels. Genome Biol Evol. 2020 Apr 1;12(4):413-428. doi: 10.1093/gbe/evaa037.