| Genus | Oryza |
| Species | officinalis |
| Common Name | Wild rice (CC-genome) |
| Abbreviation | O. officinalis |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=24 |
| Genome Size | 584 Mb |
| Genome Assemblies | 2 |
| Cross Reference | NCBI taxon: 4535 |
Oryza officinalis is a species of monocot in the family Poaceae (grass family).
Oryza officinalis v1.0 S genes
| Query | Scaffold | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
| DUF247I-SΨ | BDMV01000005.1 | 45417702 | 7927411-7927560 | Olongistaminata | 74 | DUF247 |
| DUF247II-SΨ | BDMV01000005.1 | 45417702 | 7912446-7912805 | Osativa | 80 | DUF247 |
| HPS10-S | BDMV01000005.1 | 45417702 | 7916092-7916194,7916296-7916441 | Osativa | 79 | - |
| DUF247II-ZΨ | BDMV01000004.1 | 42162321 | 39534564-39534785 | TturgidumZ2 | 60 | DUF247 |
| HPS10-Z | BDMV01000004.1 | 42162321 | 39528899-39529037,39529266-39529336 | LpsZ_chromosome2 | 68 | - |
The Oryza officinalis S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Oryza_officinalis |
Shenton M, Kobayashi M, Terashima S, Ohyanagi H, Copetti D, Hernández-Hernández T, Zhang J, Ohmido N, Fujita M, Toyoda A, Ikawa H, Fujiyama A, Furuumi H, Miyabayashi T, Kubo T, Kudrna D, Wing R, Yano K, Nonomura KI, Sato Y, Kurata N. Evolution and Diversity of the Wild Rice Oryza officinalis Complex, across Continents, Genome Types, and Ploidy Levels. Genome Biol Evol. 2020 Apr 1;12(4):413-428. doi: 10.1093/gbe/evaa037.