Description

Australian wild rice (Oryza meridionalis) is a species of monocot in the family Poaceae (grass family).

Whole Genomes

Whole Genome Sequences & Annotations for Oryza meridionalis

• Oryza meridionalis OmerRS3

S genes

Oryza meridionalis OmerRS3 S genes

Query	Chromosome	Size(bp)	Coordinates	tBLASTn Hit	tBLASTn %ID	Domain
DUF247I-SΨ	CM002528.2	30045131	5986893-5987822	Olongistaminata	69	DUF247
DUF247II-SΨ	CM002528.2	30045131	5976278-5976823	TaestivumS1	64	DUF247
HPS10-S	CM002528.2	30045131	5984790-5984952, 5985140-5985264	LpsS_chromosome1	43	-
DUF247I-ZΨ	CM002527.2	34272791	31769277-31770383	Psupina	55	DUF247
DUF247II-ZΨ	CM002527.2	34272791	31778314-31779480	AsativaDUF247II-Z1	66	DUF247
HPS10-Z	CM002527.2	34272791	31777207-31777360, 31777505-31777584	LpsZ_chromosome2	62	-

Downloads

The Oryza meridionalis S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Oryza_meridionalis

Publications

Zhang QJ, Zhu T, Xia EH, Shi C, Liu YL, Zhang Y, Liu Y, Jiang WK, Zhao YJ, Mao SY, Zhang LP, Huang H, Jiao JY, Xu PZ, Yao QY, Zeng FC, Yang LL, Gao J, Tao DY, Wang YJ, Bennetzen JL, Gao LZ. Rapid diversification of five Oryza AA genomes associated with rice adaptation. Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):E4954-62. doi: 10.1073/pnas.1418307111.

Stein JC, Yu Y, Copetti D, Zwickl DJ, Zhang L, Zhang C, Chougule K, Gao D, Iwata A, Goicoechea JL, Wei S, Wang J, Liao Y, Wang M, Jacquemin J, Becker C, Kudrna D, Zhang J, Londono CEM, Song X, Lee S, Sanchez P, Zuccolo A, Ammiraju JSS, Talag J, Danowitz A, Rivera LF, Gschwend AR, Noutsos C, Wu CC, Kao SM, Zeng JW, Wei FJ, Zhao Q, Feng Q, El Baidouri M, Carpentier MC, Lasserre E, Cooke R, Rosa Farias DD, da Maia LC, Dos Santos RS, Nyberg KG, McNally KL, Mauleon R, Alexandrov N, Schmutz J, Flowers D, Fan C, Weigel D, Jena KK, Wicker T, Chen M, Han B, Henry R, Hsing YC, Kurata N, de Oliveira AC, Panaud O, Jackson SA, Machado CA, Sanderson MJ, Long M, Ware D, Wing RA. Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nat Genet. 2018 Feb;50(2):285-296. doi: 10.1038/s41588-018-0040-0.