Description

Oryza longistaminata is a perennial species of grass from the same genus as cultivated rice (O. sativa). It is native to most of sub-Saharan Africa and Madagascar. It has been introduced into the United States, where it is often regarded as a noxious weed. Its common names are longstamen rice and red rice. The host resistance gene, Xa21, from O. longistaminata, has been integrated into the genome of O. sativa as it confers broad resistance to rice blight disease caused by Xanthomonas oryzae pv. oryzae.

Whole Genomes

Whole Genome Sequences & Annotations for Oryza longistaminata

• Oryza longistaminata w11

S genes

Oryza longistaminata w11 S genes

Nucleotide

• Oryza longistaminata w11 DUF247I-S mRNA, complete cds
• Oryza longistaminata w11 DUF247I-Z mRNA, complete cds
• Oryza longistaminata w11 DUF247II-S mRNA, complete cds
• Oryza longistaminata w11 DUF247II-Z mRNA, complete cds
• Oryza longistaminata w11 HPS10-S mRNA, complete cds
• Oryza longistaminata w11 HPS10-Z mRNA, complete cds

Protein

• Oryza longistaminata w11 DUF247I-S protein
• Oryza longistaminata w11 DUF247I-Z protein
• Oryza longistaminata w11 DUF247II-S protein
• Oryza longistaminata w11 DUF247II-Z protein
• Oryza longistaminata w11 HPS10-S protein
• Oryza longistaminata w11 HPS10-Z protein

Downloads

The Oryza longistaminata S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Oryza_longistaminata

Publications

Zhang Y, Zhang S, Liu H, Fu B, Li L, Xie M, Song Y, Li X, Cai J, Wan W, Kui L, Huang H, Lyu J, Dong Y, Wang W, Huang L, Zhang J, Yang Q, Shan Q, Li Q, Huang W, Tao D, Wang M, Chen M, Yu Y, Wing RA, Wang W, Hu F. Genome and Comparative Transcriptomics of African Wild Rice Oryza longistaminata Provide Insights into Molecular Mechanism of Rhizomatousness and Self-Incompatibility. Mol Plant. 2015 Nov 2;8(11):1683-6. doi: 10.1016/j.molp.2015.08.006.

Li W, Zhang QJ, Zhu T, Tong Y, Li K, Shi C, Zhang Y, Liu YL, Jiang JJ, Liu Y, Xia EH, Huang H, Zhang LP, Zhang D, Shi C, Jiang WK, Zhao YJ, Mao SY, Jiao JY, Xu PZ, Yang LL, Gao LZ. Draft genomes of two outcrossing wild rice, Oryza rufipogon and O. longistaminata, reveal genomic features associated with mating-system evolution. Plant Direct. 2020 Jun 11;4(6):e00232. doi: 10.1002/pld3.232.

Li W, Li K, Zhang QJ, Zhu T, Zhang Y, Shi C, Liu YL, Xia EH, Jiang JJ, Shi C, Zhang LP, Huang H, Tong Y, Liu Y, Zhang D, Zhao Y, Jiang WK, Zhao YJ, Mao SY, Jiao JY, Xu PZ, Yang LL, Yin GY, Gao LZ. Improved hybrid de novo genome assembly and annotation of African wild rice, Oryza longistaminata, from Illumina and PacBio sequencing reads. Plant Genome. 2020 Mar;13(1):e20001. doi: 10.1002/tpg2.20001.