Oryza granulata
Overview
| Genus | Oryza |
| Species | granulata |
| Common Name | Wild rice (GG-genome) |
| Abbreviation | O. granulata |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=24 |
| Genome Size | 736 Mb |
| Genome Assemblies | 5 |
| Cross Reference | NCBI taxon: 110450 |
Organism Image
Description
Oryza meyeriana var. granulata is a varietas of Oryza meyeriana.
S genes
Oryza granulata OGRA S genes
| Query | Scaffold | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
| DUF247I-ZΨ | GWHAAKB00000018 | 2088202 | 1002990-1003484 | Amyosuroides | 67 | DUF247 |
| DUF247II-ZΨ | GWHAAKB00000018 | 2088202 | 99562-100059 | AsativaDUF247II-Z1 | 69 | DUF247 |
| HPS10-Z | GWHAAKB00000018 | 2088202 | 989371-989426,989509-989683 | Bhybridum_HPS10-Z | 48 | - |
Downloads
The Oryza granulata S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Oryza_granulata |
Publications
Wu Z, Fang D, Yang R, Gao F, An X, Zhuo X, Li Y, Yi C, Zhang T, Liang C, Cui P, Cheng Z, Luo Q. De novo genome assembly of Oryza granulata reveals rapid genome expansion and adaptive evolution. Commun Biol. 2018 Jun 29;1:84. doi: 10.1038/s42003-018-0089-4.
Shi C, Li W, Zhang QJ, Zhang Y, Tong Y, Li K, Liu YL, Gao LZ. The draft genome sequence of an upland wild rice species, Oryza granulata. Sci Data. 2020 Apr 29;7(1):131. doi: 10.1038/s41597-020-0470-2.
© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences