Miscanthus lutarioriparius

Overview

Genus Miscanthus
Species lutarioriparius
Common Name -
Abbreviation M. lutarioriparius
Ploidy Diploid
Chromosome Number 2n=2x=38
Genome Size 2150 Mb
Genome Assemblies 2
Cross Reference NCBI taxon: 422564

Description

Miscanthus lutarioriparius is a species of monocot in the family Poaceae (grass family).

Whole Genomes

Whole Genome Sequences & Annotations for Miscanthus lutarioriparius

S genes

Miscanthus lutarioriparius Mlu_assembly S genes

QueryScaffoldSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247I-SΨChr198101933333122902-33124005Shybrid69DUF247
HPS10-SChr198101933333125874-33126003,
33126124-33126233
Pvaginatum46-
DUF247I-Z1ΨChr11758288877058964-7060337LpZDUF247-I_chromosome260DUF247
DUF247I-Z2ΨChr12831583057816183-7817643Sspontaneum59DUF247
DUF247II-Z1Chr11758288877054866-7056488Shybrid56DUF247
DUF247II-Z2ΨChr12831583057811079-7811903Shybrid97DUF247
HPS10-ZChr12831583057814064-7814173,
7814586-7814655
Pnotatum48-

Downloads

The Miscanthus lutarioriparius S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Miscanthus_lutarioriparius

Publications

Miao J, Feng Q, Li Y, Zhao Q, Zhou C, Lu H, Fan D, Yan J, Lu Y, Tian Q, Li W, Weng Q, Zhang L, Zhao Y, Huang T, Li L, Huang X, Sang T, Han B. Chromosome-scale assembly and analysis of biomass crop Miscanthus lutarioriparius genome. Nat Commun. 2021 Apr 28;12(1):2458. doi: 10.1038/s41467-021-22738-4.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences