Description

Hordeum spontaneum, commonly known as wild barley or spontaneous barley, is the wild form of the grass in the family Poaceae that gave rise to the cereal barley (Hordeum vulgare). Domestication is thought to have occurred on two occasions, first about ten thousand years ago in the Fertile Crescent and again later, several thousand kilometres further east.

Whole Genomes

Whole Genome Sequences & Annotations for Hordeum spontaneum

• Hordeum spontaneum EC_S1

S genes

Hordeum spontaneum EC_S1 S genes

Query	Chromosome	Size(bp)	Coordinates	tBLASTn Hit	tBLASTn %ID	Domain
DUF247II-S	CM056660.1	560836502	84744224-84745902	LpSDUF247-II_chromosome1	75	DUF247
HPS10-Z	CM056661.1	725682262	678335003-678335144, 678335271-678335359	Amyosuroides	36	-

Downloads

The Hordeum spontaneum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Hordeum_spontaneum

Publications

Zhang W, Tan C, Hu H, Pan R, Xiao Y, Ouyang K, Zhou G, Jia Y, Zhang XQ, Hill CB, Wang P, Chapman B, Han Y, Xu L, Xu Y, Angessa T, Luo H, Westcott S, Sharma D, Nevo E, Barrero RA, Bellgard MI, He T, Tian X, Li C. Genome architecture and diverged selection shaping pattern of genomic differentiation in wild barley. Plant Biotechnol J. 2023 Jan;21(1):46-62. doi: 10.1111/pbi.13917.

Pan R, Hu H, Xiao Y, Xu L, Xu Y, Ouyang K, Li C, He T, Zhang W. High-quality wild barley genome assemblies and annotation with Nanopore long reads and Hi-C sequencing data. Sci Data. 2023 Aug 10;10(1):535. doi: 10.1038/s41597-023-02434-2.