Description

The desiccation-tolerant grass Eragrostis nindensis is a species of monocot in the family Poaceae (grass family).

Whole Genomes

Whole Genome Sequences & Annotations for Eragrostis nindensis

• Eragrostis nindensis MSU_Enin_2.1

S genes

Eragrostis nindensis MSU_Enin_2.1 S genes

Query	Contig	Size(bp)	Coordinates	tBLASTn Hit	tBLASTn %ID	Domain
DUF247I-S1	Contig_28	2750635	1250331-1252016	Cpurpureus	69	DUF247
DUF247I-S2	Contig_98	1356931	828766-830409	Cpurpureus	65	DUF247
DUF247I-S3	Contig_688	366405	236179-237840	Cpurpureus	64	DUF247
DUF247I-S4Ψ	Contig_1600	148969	94729-95409	Pvirgatum	68	DUF247
DUF247II-S1	Contig_28	2750635	1245974-1247605	Pvirgatum	61	DUF247
DUF247II-S2	Contig_98	1356931	834907-836535	Pvirgatum	57	DUF247
DUF247II-S3Ψ	Contig_688	366405	242246-242827	Pvirgatum	68	DUF247
DUF247II-S4	Contig_1600	148969	100700-102319	Pvirgatum	64	DUF247
HPS10-S1	Contig_28	2750635	1553432-1553550, 1553695-1553863	Pvaginatum	55	-
HPS10-S2	Contig_98	1356931	832801-832963, 833050-833159	Pvaginatum	67	-
HPS10-S3	Contig_688	366405	239547-239709, 239825-239931	Pvaginatum	61	-
HPS10-S4	Contig_1600	148969	98105-98267, 98383-98489	Pvaginatum	61	-
DUF247I-Z1	Contig_116	1255800	638520-640085	Pvaginatum	61	DUF247
DUF247I-Z2	Contig_418	527687	374324-375883	Pvaginatum	58	DUF247
DUF247I-Z3Ψ	Contig_499	472456	420558-421688	Pvaginatum	46	DUF247
DUF247I-Z4	Contig_1512	162405	64047-65663	Pvaginatum	57	DUF247
DUF247II-Z1	Contig_116	1255800	643122-644780	Pvaginatum	48	DUF247
DUF247II-Z2	Contig_418	527687	377860-379527	Pvaginatum	47	DUF247
DUF247II-Z3Ψ	Contig_499	472456	424555-425979	Pvaginatum	65	DUF247
DUF247II-Z4	Contig_1512	162405	60519-62189	Pvaginatum	48	DUF247
HPS10-Z1	Contig_13	3680791	1226289-1226395, 1226574-1226709	Pvaginatum	72	-
HPS10-Z2	Contig_116	1255800	636211-636346, 636524-636627	Pvaginatum	38	-
HPS10-Z3	Contig_418	527687	372584-372719, 373060-373166	Pvaginatum	36	-
HPS10-Z4	Contig_418	527687	376697-376847, 376932-377041	Pvaginatum	51	-
HPS10-Z5	Contig_499	472456	418293-418428, 418604-418713	Pvaginatum	72	-
HPS10-Z6	Contig_1512	162405	44826-45000, 45058-45164	Pvaginatum	70	-

Downloads

The Eragrostis nindensis S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Eragrostis_nindensis

Publications

Pardo J, Man Wai C, Chay H, Madden CF, Hilhorst HWM, Farrant JM, VanBuren R. Intertwined signatures of desiccation and drought tolerance in grasses. Proc Natl Acad Sci U S A. 2020 May 5;117(18):10079-10088. doi: 10.1073/pnas.2001928117.