Dichanthelium oligosanthes

Overview

Genus Dichanthelium
Species oligosanthes
Common Name Heller's rosette grass, fewanther obscuregrass,
and few-flowered panicgrass
Abbreviation D. oligosanthes
Ploidy Diploid
Chromosome Number -
Genome Size 750 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 888268

Organism Image

Description

Dichanthelium oligosanthes, known as Heller's rosette grass, fewanther obscuregrass, and few-flowered panicgrass, is a frost-tolerant, perennial grass species native to North America. It is found primarily in the contiguous United States with specimens also reported in British Columbia and Alberta in Canada, as well as south of the Rio Grande in northern Mexico. D. oligosanthes is most frequently in partially shaded glens within woods, recently cut forests, and grassy banks. The species is primarily cleistogamous, with individual florets often self pollinate without opening. Despite being a member of the grass subfamily Panicoideae which includes many species which utilize C4 photosynthesis, D. oligosanthes retains the more ancestral trait, using a C3 photosynthetic pathway. The genome of Dichanthelium oligosanthes is carried on nine chromosomes and is estimated to be between 750 and 950 megabases in size. A draft genome assembly was generated from the progeny of a single self-pollinated plant collected from the Shaw Nature Reserve near Gray Summit, Missouri.

Whole Genomes

Whole Genome Sequences & Annotations for Dichanthelium oligosanthes

S genes

Dichanthelium oligosanthes ASM163321v2 S genes

QueryScaffoldSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247II-ZΨKV775688.1310688288630-289619Shybrid55DUF247
HPS10-ZKV775688.1310688290853-290956, 291059-291194Bsylvaticum_HPS10-Z46-

Downloads

The Dichanthelium oligosanthes S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Dichanthelium_oligosanthes

Publications

Studer AJ, Schnable JC, Weissmann S, Kolbe AR, McKain MR, Shao Y, Cousins AB, Kellogg EA, Brutnell TP. The draft genome of the C3 panicoid grass species Dichanthelium oligosanthes. Genome Biol. 2016 Oct 28;17(1):223. doi: 10.1186/s13059-016-1080-3.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences