Description

Brachypodium sylvaticum, commonly known as false-brome, slender false brome or wood false brome, is a perennial grass native to Europe, Asia and Africa. It has a broad native range stretching from North Africa to Eurasia. The bunchgrass is most commonly found in forests and woodlands, preferring the shaded canopy, but may grow in open areas. It prefers well drained neutral and calcerous soils, and avoids wet conditions.

Whole Genomes

Whole Genome Sequences & Annotations for Brachypodium sylvaticum

• Brachypodium sylvaticum Ain1

S genes

Brachypodium sylvaticum Ain1 S genes

Query	Chromosome	Size(bp)	Coordinates	tBLASTn Hit	tBLASTn %ID	Domain
DUF247I-SΨ	Chr08	36498807	29131471-29132514	LpSDUF247-I_chromosome1	82	DUF247
DUF247II-S	Chr08	36498807	29143869-29145467	LpSDUF247-II_chromosome1	74	DUF247
HPS10-S	Chr08	36498807	29134246-29134379, 29134487-29134613	LpsS_contig11029	50	-
DUF247I-Z	Chr09	33917238	30413008-30414615	LpZDUF247-I_chromosome2	58	DUF247
DUF247II-Z	Chr09	33917238	30418258-30419787	Ainsularis_DUF247II-Z1	53	DUF247
HPS10-Z	Chr09	33917238	3042186-3042348, 3042427-3042536	LmsZ_scaffold1905	58	-

Downloads

The Brachypodium sylvaticum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Brachypodium_sylvaticum

Publications

Lei L, Gordon SP, Liu L, Sade N, Lovell JT, Rubio Wilhelmi MDM, Singan V, Sreedasyam A, Hestrin R, Phillips J, Hernandez BT, Barry K, Shu S, Jenkins J, Schmutz J, Goodstein DM, Thilmony R, Blumwald E, Vogel JP. The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum. G3 (Bethesda). 2023 Dec 29;14(1):jkad245. doi: 10.1093/g3journal/jkad245.