Aegilops speltoides
Overview
| Genus | Aegilops |
| Species | speltoides |
| Common Name | - |
| Abbreviation | A. speltoides |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=14 |
| Genome Size | 4600 Mb |
| Genome Assemblies | 4 |
| Cross Reference | NCBI taxon: 4573 |
Organism Image
Description
Aegilops speltoides is a species of monocot in the family Poaceae (grass family).
S genes
Aegilops speltoides S genes
| Query | Chromosome | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
| DUF247I-S | GWHBFXR00000001.1 | 470101627 | 104122359-104123960 | LpSDUF247-I_chromosome1 | 80 | DUF247 |
| DUF247II-S | GWHBFXR00000001.1 | 470101627 | 103990663-103992231 | LpSDUF247-II_chromosome1 | 73 | DUF247 |
| HPS10-S | GWHBFXR00000001.1 | 470101627 | 104107428-104107602,104107864-104107997 | LpsS_contig12948 | 60 | - |
| DUF247I-Z | GWHBFXR00000002.1 | 583316874 | 544185491-544187086 | LpZDUF247-I_chromosome2 | 58 | DUF247 |
| DUF247II-ZΨ | GWHBFXR00000002.1 | 583316874 | 544214992-544216095 | AlongiglumisDUF247II-Z | 49 | DUF247 |
Downloads
The Aegilops speltoides S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Aegilops_speltoides |
Publications
Li LF, Zhang ZB, Wang ZH, Li N, Sha Y, Wang XF, Ding N, Li Y, Zhao J, Wu Y, Gong L, Mafessoni F, Levy AA, Liu B. Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome. Mol Plant. 2022 Mar 7;15(3):488-503. doi: 10.1016/j.molp.2021.12.019.
© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences