Aegilops longissima

Overview

Genus Aegilops
Species longissima
Common Name -
Abbreviation A. longissima
Ploidy Diploid
Chromosome Number 2n=2x=14
Genome Size 6220 Mb
Genome Assemblies 3
Cross Reference NCBI taxon: 4486

Organism Image

Description

Aegilops longissima (syn. Aegilops sharonense Eig, Sitopsis longissima (Schweinf. & Muschl.) Á. Löve, Triticum longissimum (Schweinf. & Muschl.) Bowden, Triticum sharonense L.) is a species in the family Poaceae. It is native to the Levant & Egypt.

Whole Genomes

Whole Genome Sequences & Annotations for Aegilops longissima

S genes

Aegilops longissima S genes

QueryChromosomeSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247I-SGWHBFXT00000001.1665357050111228387-111229982LpSDUF247-I_chromosome179DUF247
DUF247II-SGWHBFXT00000001.1665357050111192405-111193985LpSDUF247-II_chromosome171DUF247
HPS10-SGWHBFXT00000001.1665357050111226423-111226546,
111226702-111226841
LpsS_contig1294853-
DUF247II-ZΨGWHBFXT00000002.1852151948792218099-792218695AsativaDUF247II-Z177DUF247
HPS10-ZGWHBFXT00000002.1852151948792220358-792220479,
792220550-792220712
Bhybridum_HPS10-Z67-

Downloads

The Aegilops longissima S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Aegilops_longissima

Publications

Li LF, Zhang ZB, Wang ZH, Li N, Sha Y, Wang XF, Ding N, Li Y, Zhao J, Wu Y, Gong L, Mafessoni F, Levy AA, Liu B. Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome. Mol Plant. 2022 Mar 7;15(3):488-503. doi: 10.1016/j.molp.2021.12.019.

Avni R, Lux T, Minz-Dub A, Millet E, Sela H, Distelfeld A, Deek J, Yu G, Steuernagel B, Pozniak C, Ens J, Gundlach H, Mayer KFX, Himmelbach A, Stein N, Mascher M, Spannagl M, Wulff BBH, Sharon A. Genome sequences of three Aegilops species of the section Sitopsis reveal phylogenetic relationships and provide resources for wheat improvement. Plant J. 2022 Apr;110(1):179-192. doi: 10.1111/tpj.15664.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences