Aegilops bicornis

Overview

Genus Aegilops
Species bicornis
Common Name -
Abbreviation A. bicornis
Ploidy Diploid
Chromosome Number 2n=2x=14
Genome Size 5730 Mb
Genome Assemblies 3
Cross Reference NCBI taxon: 4483

Organism Image

Description

Aegilops bicornis (syn. Aegilops bicorne (misapplied), Triticum bicorne Forssk.) is a species in the family Poaceae native to the Levant, Western Mesopotamia, Egypt & Libya.Elsewhere this plant is commonly considered a weed.

Whole Genomes

Whole Genome Sequences & Annotations for Aegilops bicornis

S genes

Aegilops bicornis ASM2160514v1 S genes

QueryChromosomeSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247I-SGWHBFXS00000001.1674339718150866909-150868504LpSDUF247-I_chromosome180DUF247
DUF247II-SGWHBFXS00000001.1674339718150875149-150876729LpSDUF247-II_chromosome170DUF247
HPS10-SGWHBFXS00000001.1674339718150870033-150870172,
150870368-150870533
LpsS_contig1294851-
DUF247I-ZΨGWHBFXS00000002.1873736323810483225-810483644LpZDUF247-I_chromosome275DUF247
DUF247II-ZΨGWHBFXS00000002.1873736323810747387-810747875AsativaDUF247II-Z176DUF247
HPS10-ZGWHBFXS00000002.1873736323810476550-810476644,
810476742-810476904
Bhybridum_HPS10-Z67-

Downloads

The Aegilops bicornis S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Aegilops_bicornis

Publications

Li LF, Zhang ZB, Wang ZH, Li N, Sha Y, Wang XF, Ding N, Li Y, Zhao J, Wu Y, Gong L, Mafessoni F, Levy AA, Liu B. Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome. Mol Plant. 2022 Mar 7;15(3):488-503. doi: 10.1016/j.molp.2021.12.019.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences